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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sopen06g030120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon
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Family | EIL | ||||||||
Protein Properties | Length: 610aa MW: 69559.6 Da PI: 6.2511 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 501.4 | 4.5e-153 | 51 | 428 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLra 93 +el++rmw+d+m+lkrlke++k+ ke ++ +k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+Lr+ Sopen06g030120.1 51 DELERRMWRDKMKLKRLKEMSKS----KEG-VDPAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRE 138 79*******************98....677.8999********************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT- CS EIN3 94 WWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelgl 186 WWk+kv+fdrngpaai+kyqa+++i++ +++++ ++h+l+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWPtG+e+ww++lgl Sopen06g030120.1 139 WWKDKVRFDRNGPAAIAKYQADHAIPGMNEGSNP-VGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGQEDWWPQLGL 230 ********************************87.99******************************************************** PP -TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XX.XXXXXXXXXXX CS EIN3 187 skdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ss.slrkqspkvtl 276 kdqg pykkphdlkkawkv+vLtavikhm p+i++ir+l+rqsk+lqdkm+akes+++l++++qee+++++++++ ++ s+ s ++ l Sopen06g030120.1 231 HKDQGSLPYKKPHDLKKAWKVGVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAIISQEEALARELYPDrcPPlSSAGVSGNFML 323 *****************************************************************************8633566779****** PP XXXXXXXXXXXXXXX.XXXXXXXXXX..............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XX CS EIN3 277 sceqkedvegkkeskikhvqavktta..............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgset 339 ++++++dveg +++ +v+++k ++ ++++ krk + e++ ++++++ +tc+ q++++e Sopen06g030120.1 324 NDSSEYDVEGAQDEPNFDVHEQKPNHlnllnicaerfketmplqqqshpnkdelitNLDFSLKRK-QANEPTVMMDQKI-YTCEFLQCPHNEL 414 *********777777799999999999*****************************99******9.7888899988876.************* PP XXXXXXXXXXXXXX CS EIN3 340 elifadknsisqne 353 +++f+d++s+++++ Sopen06g030120.1 415 RHGFQDRSSRDNHQ 428 ************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 3.0E-128 | 51 | 298 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 3.6E-74 | 172 | 308 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 2.62E-60 | 177 | 301 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 610 aa Download sequence Send to blast |
MMMFEEMGFC GDLDFFPAPL KEVEVSAPQS QTEPDSVVDD DYSDEEEIEV DELERRMWRD 60 KMKLKRLKEM SKSKEGVDPA KQRQSQEQAR RKKMSRAQDG ILKYMLKMME VCKAQGFVYG 120 IIPEKGKPVS GASDNLREWW KDKVRFDRNG PAAIAKYQAD HAIPGMNEGS NPVGPTPHTL 180 QELQDTTLGS LLSALMQHCD PPQRRFPLEK GVPPPWWPTG QEDWWPQLGL HKDQGSLPYK 240 KPHDLKKAWK VGVLTAVIKH MFPDIAKIRK LVRQSKCLQD KMTAKESATW LAIISQEEAL 300 ARELYPDRCP PLSSAGVSGN FMLNDSSEYD VEGAQDEPNF DVHEQKPNHL NLLNICAERF 360 KETMPLQQQS HPNKDELITN LDFSLKRKQA NEPTVMMDQK IYTCEFLQCP HNELRHGFQD 420 RSSRDNHQFA CLYRSSSRFG VSNFQINEVK PVVFPQQYVQ PKSSALPVNQ GPPSFDLSGI 480 GVPEDGQRMI NELMSIYDSD VQGSKRQNRG NIALTKEQPH QQPRVHQDNY LLSQGIMDGN 540 IFKNTNISTT QSMLPQVDPF DQSKAFNAGS NDNFHFMFGS PFNIQSTNYN GNLPSIGYDT 600 TPKQDAPIWY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 7e-85 | 176 | 307 | 2 | 133 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 7e-85 | 176 | 307 | 2 | 133 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HG975445 | 0.0 | HG975445.1 Solanum pennellii chromosome ch06, complete genome. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015079067.1 | 0.0 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like | ||||
Refseq | XP_015079066.1 | 0.0 | PREDICTED: protein ETHYLENE INSENSITIVE 3-like | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | Q94FV4 | 0.0 | Q94FV4_SOLLC; EIL1 | ||||
STRING | Solyc06g073720.1.1 | 0.0 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA304 | 23 | 178 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |